Stem-loop sequence tae-MIR1120b

Accession

MI0030404 (change log)

Description

Triticum aestivum miR1120b stem-loop

Gene family

MIPF0000443; MIR1120

Literature search

13 open access papers mention tae-MIR1120b
(46 sentences)

Stem-loop

   uaaa                a                     cua 
5'     uacucccucuguccca aauauaagaacauuuuugaca   u
       |||||||||||||||| |||||||||||||||||||||   u
3'     augagggagacagggu uuauauucuuguaaaaauugu   g
   uuug                g                     aau 

Deep sequencing

257234 reads, 596 reads per million, 116 experiments

Confidence

Annotation confidence: not enough data

Feedback: Do you believe this miRNA is real?

Genome context

• Coordinates: 7B: 15312620-15312712 [+]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0030404

Mature sequence tae-miR1120b-3p

• Accession: MIMAT0035794
• Sequence: 63 - uucuuauauugugggacagag - 83
• Deep sequencing: 233528 reads, 116 experiments
• Evidence: experimental; Illumina [1]

References

1. PMID:24734873 "Identification and characterization of microRNAs in the flag leaf and developing seed of wheat (Triticum aestivum L.)" Han R, Jian C, Lv J, Yan Y, Chi Q, Li Z, Wang Q, Zhang J, Liu X, Zhao H BMC Genomics. 15:289(2014).