miRBase entry: tae-MIR9657b

Stem-loop tae-MIR9657b


Accession
MI0030420
Description
Triticum aestivum tae-MIR9657b precursor miRNA
Gene family
MIPF0001955; MIR9657

Literature search
2 open access papers mention tae-MIR9657b
(5 sentences)

Sequence

15974 reads, 101 reads per million, 115 experiments
auagcggcgugcugacuccgUUCGUCGGAGAAGCAUGUUGCggaccagcgccgCGUGCUUCCUCGUCGAACGGUggcgaccacguugcacgcgc
...((((((((.(..(((((((((.(((.(((((((((.(((......))).))))))))).))).))))))).))..).))))))))......

Structure
---aua        c ga  -       U   A         U   ga 
      gcggcgug u  cu ccgUUCG CGG GAAGCAUGU GCg  c
      |||||||| |  || ||||||| ||| ||||||||| |||   
      cguugcac a  gg GGCAAGC GCU CUUCGUGCg cgc  c
cgcgca        c gc  U       U   C         c   ga 


Annotation confidence High
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature tae-miR9657b-5p

Accession MIMAT0035810
Description Triticum aestivum tae-miR9657b-5p mature miRNA
Sequence 21 - UUCGUCGGAGAAGCAUGUUGC - 41
Evidence experimental
Illumina [1]

Mature tae-miR9657b-3p

Accession MIMAT0035811
Description Triticum aestivum tae-miR9657b-3p mature miRNA
Sequence 54 - CGUGCUUCCUCGUCGAACGGU - 74
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24734873
    Identification and characterization of microRNAs in the flag leaf and developing seed of wheat (Triticum aestivum L.)
    Han R, Jian C, Lv J, Yan Y, Chi Q, Li Z, Wang Q, Zhang J, Liu X, Zhao H
    BMC Genomics (2014) 15:289