Stem-loop chi-let-7g

Accession

MI0030585

Description

Capra hircus chi-let-7g precursor miRNA

Literature search

61 open access papers mention chi-let-7g
(251 sentences)

Sequence

1883521 reads, 5756.0 reads per million, 36 experiments

ccuuuugccugauuccaggcUGAGGUAGUAGUUUGUACAGUUugagggucuaugauaccacccgguacaggagauaaCUGUACAGGCCACUGCCUUGCcgggaacag
........(((.((((.(((.((((((((.((((((((((((.....((((.((.((((....))))))..)))))))))))))))).))))))))))).)))))))

Structure

ccuuuugc   a    a   U        A            ugagg    -a  a    a 
        cug uucc ggc GAGGUAGU GUUUGUACAGUU     gucu  ug uacc c
        ||| |||| ||| |||||||| ||||||||||||     ||||  || ||||  
        gac aagg cCG UUCCGUCA CGGACAUGUCaa     uaga  ac augg c
--------   -    g   -        C            -----    gg  -    c 

Annotation confidence High

Genome context

chr22: 50154243-50154349 [+]

Mature chi-let-7g-5p

• Accession: MIMAT0035892
• Description: Capra hircus chi-let-7g-5p mature miRNA
• Sequence: 21 - UGAGGUAGUAGUUUGUACAGUU - 42
• Evidence: experimental ; Illumina [1]

Mature chi-let-7g-3p

• Accession: MIMAT0035893
• Description: Capra hircus chi-let-7g-3p mature miRNA
• Sequence: 78 - CUGUACAGGCCACUGCCUUGC - 98
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23981187
   Identification of conservative microRNAs in Saanen dairy goat testis through deep sequencing
   "Wu J, Zhu H, Song W, Li M, Liu C, Li N, Tang F, Mu H, Liao M, Li X, Guan W, Li X, Hua J"
   "Reprod Domest Anim (2014) 49:32-40