miRBase entry: chi-let-7g

Stem-loop chi-let-7g


Accession
MI0030585
Description
Capra hircus chi-let-7g precursor miRNA
Gene family
MIPF0000002; let-7

Literature search
16 open access papers mention chi-let-7g
(41 sentences)

Sequence

ccuuuugccugauuccaggcUGAGGUAGUAGUUUGUACAGUUugagggucuaugauaccacccgguacaggagauaaCUGUACAGGCCACUGCCUUGCCgggaacag
........(((.((((.(((.((((((((.((((((((((((.....((((.((.((((....))))))..)))))))))))))))).))))))))))).)))))))

Structure
ccuuuugc   a    a   U        A            ugagg    -a  a    a 
        cug uucc ggc GAGGUAGU GUUUGUACAGUU     gucu  ug uacc c
        ||| |||| ||| |||||||| ||||||||||||     ||||  || ||||  
        gac aagg CCG UUCCGUCA CGGACAUGUCaa     uaga  ac augg c
--------   -    g   -        C            -----    gg  -    c 


Annotation confidence Not enough data
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Genome context
chr22: 50154243-50154349 [+]

Database links

Mature chi-let-7g-5p

Accession MIMAT0035892
Description Capra hircus chi-let-7g-5p mature miRNA
Sequence 21 - UGAGGUAGUAGUUUGUACAGUU - 42
Evidence experimental
Illumina [1]

Mature chi-let-7g-3p

Accession MIMAT0035893
Description Capra hircus chi-let-7g-3p mature miRNA
Sequence 78 - CUGUACAGGCCACUGCCUUGCC - 99
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23981187
    Identification of conservative microRNAs in Saanen dairy goat testis through deep sequencing
    "Wu J, Zhu H, Song W, Li M, Liu C, Li N, Tang F, Mu H, Liao M, Li X, Guan W, Li X, Hua J"
    "Reprod Domest Anim (2014) 49:32-40