Stem-loop chi-mir-125b

Accession

MI0030606

Description

Capra hircus chi-mir-125b precursor miRNA

Gene family

MIPF0000033; mir-10

Literature search

10 open access papers mention chi-mir-125b
(26 sentences)

Sequence

gacuuuuccuagUCCCUGAGACCCUAACUUGUgagguauuuuaguaacaucACAAGUCAGGCUCUUGGGACCuaggcggaggg
..((((.(((((((((.((((.(((.((((((((.((.........)).)))))))).))).)))))))).))))).))))..

Structure

ga    u     -    U    C   A        g  auu 
  cuuu ccuag UCCC GAGA CCU ACUUGUga gu   u
  |||| ||||| |||| |||| ||| |||||||| ||   u
  gagg ggauC AGGG UUCU GGA UGAACAcu ca   a
gg    c     C    -    C   C        a  aug 

Annotation confidence Not enough data

Genome context

chr1: 20759329-20759411 [-]

Mature chi-miR-125b-5p

• Accession: MIMAT0035925
• Description: Capra hircus chi-miR-125b-5p mature miRNA
• Sequence: 13 - UCCCUGAGACCCUAACUUGU - 32
• Evidence: experimental ; Illumina [1]

Mature chi-miR-125b-3p

• Accession: MIMAT0035926
• Description: Capra hircus chi-miR-125b-3p mature miRNA
• Sequence: 52 - ACAAGUCAGGCUCUUGGGACC - 72
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23981187
   Identification of conservative microRNAs in Saanen dairy goat testis through deep sequencing
   "Wu J, Zhu H, Song W, Li M, Liu C, Li N, Tang F, Mu H, Liao M, Li X, Guan W, Li X, Hua J"
   "Reprod Domest Anim (2014) 49:32-40