miRBase entry: chi-mir-126

Stem-loop chi-mir-126


Accession
MI0030607
Description
Capra hircus chi-mir-126 precursor miRNA
Gene family
MIPF0000115; mir-126

Literature search
5 open access papers mention chi-mir-126
(11 sentences)

Sequence

gcuggugacgggaCAUUAUUACUUUUGGUACGCGCugugacacuucaaacUCGUACCGUGAGUAAUAAUGCgccgucagcag
.(((.((((((..(((((((((((.(((((((.....(((....)))....))))))).)))))))))))..)))))).)))

Structure
g   g      ga           U       CGCug   c 
 cug ugacgg  CAUUAUUACUU UGGUACG     uga a
 ||| ||||||  ||||||||||| |||||||     |||  
 gac acugcc  GUAAUAAUGAG GCCAUGC     acu c
-   g      gC           U       -Ucaa   u 


Annotation confidence Not enough data
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Genome context
chr11: 107845630-107845711 [+]

Database links

Mature chi-miR-126-5p

Accession MIMAT0035927
Description Capra hircus chi-miR-126-5p mature miRNA
Sequence 14 - CAUUAUUACUUUUGGUACGCGC - 35
Evidence experimental
Illumina [1]

Mature chi-miR-126-3p

Accession MIMAT0035928
Description Capra hircus chi-miR-126-3p mature miRNA
Sequence 51 - UCGUACCGUGAGUAAUAAUGC - 71
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23981187
    Identification of conservative microRNAs in Saanen dairy goat testis through deep sequencing
    "Wu J, Zhu H, Song W, Li M, Liu C, Li N, Tang F, Mu H, Liao M, Li X, Guan W, Li X, Hua J"
    "Reprod Domest Anim (2014) 49:32-40