Stem-loop sequence chi-mir-133a

Accession

MI0030618 (change log)

Description

Capra hircus miR-133a stem-loop

Gene family

MIPF0000029; mir-133

Literature search

8 open access papers mention chi-mir-133a
(32 sentences)

Stem-loop

   cgggaccg     uuu    a       aa  u  a        aacug 
5'         aaugc   gcua agcuggu  aa gg accaaauc     u
           |||||   |||| |||||||  || || ||||||||      
3'         uuacg   cgau ucgacca  uu cc ugguuuag     u
   -----uag     ugu    g       ac  c  c        guagc 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (CHIR_2.0; GCA_000317765.2): chr13: 55645237-55645331 [-]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0030618

Mature sequence chi-miR-133a-5p

• Accession: MIMAT0035947
• Sequence: 22 - agcugguaaaauggaaccaaau - 43
• Evidence: experimental; Illumina [1]

Mature sequence chi-miR-133a-3p

• Accession: MIMAT0035948
• Sequence: 59 - uuugguccccuucaaccagcugu - 81
• Evidence: experimental; Illumina [1]

References

1. PMID:23981187 "Identification of conservative microRNAs in Saanen dairy goat testis through deep sequencing" Wu J, Zhu H, Song W, Li M, Liu C, Li N, Tang F, Mu H, Liao M, Li X, Guan W, Li X, Hua J Reprod Domest Anim. 49:32-40(2014).