Stem-loop chi-mir-135b

Accession

MI0030623

Description

Capra hircus chi-mir-135b precursor miRNA

Gene family

MIPF0000028; mir-135

Literature search

1 open access papers mention chi-mir-135b
(1 sentences)

Sequence

gcucugcuguggccUAUGGCUUUUCAUUCCUAUGUGAuuacuguuccaaacucAUGUAGGGCUAAAAGCCAUGGguuacagugaggggcgcgcgccuacuccugc
.(((.(((((((((((((((((((...((((((((((..............))))))))))..))))))))))))))))))))))((((....))))........

Structure

-------------------g   u                   CAU          uuacug 
                    cuc gcuguggccUAUGGCUUUU   UCCUAUGUGA      u
                    ||| |||||||||||||||||||   ||||||||||       
                    gag ugacauugGGUACCGAAAA   GGGAUGUAcu      u
cguccucauccgcgcgcggg   -                   -UC          caaacc 

Annotation confidence Not enough data

Genome context

chr16: 2864806-2864910 [-]

Mature chi-miR-135b-5p

• Accession: MIMAT0035953
• Description: Capra hircus chi-miR-135b-5p mature miRNA
• Sequence: 15 - UAUGGCUUUUCAUUCCUAUGUGA - 37
• Evidence: experimental ; Illumina [1]

Mature chi-miR-135b-3p

• Accession: MIMAT0035954
• Description: Capra hircus chi-miR-135b-3p mature miRNA
• Sequence: 54 - AUGUAGGGCUAAAAGCCAUGG - 74
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23981187
   Identification of conservative microRNAs in Saanen dairy goat testis through deep sequencing
   "Wu J, Zhu H, Song W, Li M, Liu C, Li N, Tang F, Mu H, Liao M, Li X, Guan W, Li X, Hua J"
   "Reprod Domest Anim (2014) 49:32-40