Stem-loop sequence chi-mir-196a

Accession

MI0030671 (change log)

Description

Capra hircus miR-196a stem-loop

Gene family

MIPF0000031; mir-196

Literature search

6 open access papers mention chi-mir-196a
(11 sentences)

Stem-loop

   u  a ugg       ga    a ua   a    c         - gc u  a 
5'  ga c   aacugcu  guga u  ggu guuu auguuguug g  c gg u
    || |   |||||||  |||| |  ||| |||| ||||||||| |  | ||  
3'  cu g   uugacgg  cacu a  cca caaa uacagcaac c  g uc u
   c  c uca       --    c gc   c    u         a aa -  u 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (CHIR_2.0; GCA_000317765.2): chr19: 38976510-38976611 [+]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0030671

Mature sequence chi-miR-196a

• Accession: MIMAT0036032
• Sequence: 24 - uagguaguuucauguuguugg - 44
• Evidence: experimental; Illumina [1]

References

1. PMID:23981187 "Identification of conservative microRNAs in Saanen dairy goat testis through deep sequencing" Wu J, Zhu H, Song W, Li M, Liu C, Li N, Tang F, Mu H, Liao M, Li X, Guan W, Li X, Hua J Reprod Domest Anim. 49:32-40(2014).