Stem-loop chi-mir-19a

Accession

MI0030677

Description

Capra hircus chi-mir-19a precursor miRNA

Gene family

MIPF0000011; mir-19

Literature search

1 open access papers mention chi-mir-19a
(1 sentences)

Sequence

gcaguccucuguuaguuuugcauaguugcacuacaagaagaauguaguUGUGCAAAUCUAUGCAAAACUGAugguggccugc
((((.((.(((((((((((((((((((((((((((.......))))...))))))..))))))))))))))))).)).))))

Structure

    u  u                 --      ---    ag 
gcag cc cuguuaguuuugcauag  uugcac   uaca  a
|||| || |||||||||||||||||  ||||||   ||||  a
cguc gg gguAGUCAAAACGUAUC  AACGUG   augu  g
    c  u                 UA      Uug    aa 

Annotation confidence Not enough data

Genome context

chr12: 66729756-66729837 [+]

Clustered miRNAs

5 other miRNAs are < 10 kb from chi-mir-19a

Mature chi-miR-19a

• Accession: MIMAT0036042
• Description: Capra hircus chi-miR-19a mature miRNA
• Sequence: 49 - UGUGCAAAUCUAUGCAAAACUGA - 71
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23981187
   Identification of conservative microRNAs in Saanen dairy goat testis through deep sequencing
   "Wu J, Zhu H, Song W, Li M, Liu C, Li N, Tang F, Mu H, Liao M, Li X, Guan W, Li X, Hua J"
   "Reprod Domest Anim (2014) 49:32-40