Stem-loop chi-mir-19b

Accession

MI0030678

Description

Capra hircus chi-mir-19b precursor miRNA

Gene family

MIPF0000011; mir-19

Sequence

cacuguucuaugguuAGUUUUGCAGGUUUGCAUCCAGCugugugauauucugcUGUGCAAAUCCAUGCAAAACUGAcugugguagug
(((((..(((((((((((((((((((((((((..((((.............)))))))))).)).))))))))))))))))))))))

Structure

     uu                 -  -      UC    ugugu 
cacug  cuaugguuAGUUUUGCA GG UUUGCA  CAGC     g
|||||  ||||||||||||||||| || ||||||  ||||     a
gugau  ggugucAGUCAAAACGU CC AAACGU  GUcg     u
     --                 A  U      --    ucuua 

Annotation confidence Not enough data

Genome context

chr12: 66730053-66730139 [+]

Clustered miRNAs

5 other miRNAs are < 10 kb from chi-mir-19b

Mature chi-miR-19b-5p

• Accession: MIMAT0036043
• Description: Capra hircus chi-miR-19b-5p mature miRNA
• Sequence: 16 - AGUUUUGCAGGUUUGCAUCCAGC - 38
• Evidence: experimental ; Illumina [1]

Mature chi-miR-19b-3p

• Accession: MIMAT0036044
• Description: Capra hircus chi-miR-19b-3p mature miRNA
• Sequence: 54 - UGUGCAAAUCCAUGCAAAACUGA - 76
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23981187
   Identification of conservative microRNAs in Saanen dairy goat testis through deep sequencing
   "Wu J, Zhu H, Song W, Li M, Liu C, Li N, Tang F, Mu H, Liao M, Li X, Guan W, Li X, Hua J"
   "Reprod Domest Anim (2014) 49:32-40