miRBase entry: chi-mir-202

Stem-loop chi-mir-202


Accession
MI0030682
Description
Capra hircus chi-mir-202 precursor miRNA
Gene family
MIPF0000121; mir-202

Literature search
2 open access papers mention chi-mir-202
(2 sentences)

Sequence

gccacucgcuguuccuuuUUCCUAUGCAUAUACUUCUUUgagggucuggccuaaAGAGGUGUAGGGCAUGGGAAaauggggccccgagguuccccugc
....((((..(((((.(((((((((((.(((((((((((.(((......))))))))))))))..))))))))))).)))))..))))..........

Structure
------gcca    cu     u           -A           g   gu 
          cucg  guucc uuUUCCUAUGC  UAUACUUCUUU agg  c
          ||||  ||||| |||||||||||  ||||||||||| |||   
          gagc  cgggg aaAAGGGUACG  AUGUGGAGAaa ucc  u
cguccccuug    cc     u           GG           -   gg 


Annotation confidence Not enough data
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Genome context
chr26: 52891745-52891842 [-]

Database links

Mature chi-miR-202-5p

Accession MIMAT0036048
Description Capra hircus chi-miR-202-5p mature miRNA
Sequence 19 - UUCCUAUGCAUAUACUUCUUU - 39
Evidence experimental
Illumina [1]

Mature chi-miR-202-3p

Accession MIMAT0036049
Description Capra hircus chi-miR-202-3p mature miRNA
Sequence 55 - AGAGGUGUAGGGCAUGGGAA - 74
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23981187
    Identification of conservative microRNAs in Saanen dairy goat testis through deep sequencing
    "Wu J, Zhu H, Song W, Li M, Liu C, Li N, Tang F, Mu H, Liao M, Li X, Guan W, Li X, Hua J"
    "Reprod Domest Anim (2014) 49:32-40