Stem-loop chi-mir-219

Accession

MI0030695

Description

Capra hircus chi-mir-219 precursor miRNA

Gene family

MIPF0000044; mir-219

Sequence

acucaggggcuucgccacUGAUUGUCCAAACGCAAUUCUuguacgagucugcggccaaccgagaauuguggcuggacaucuguggcugagc
........((((.(((((.(((.(((((..(((((((((((...(.(((...))))...)))))))))))..)))))))).))))).))))

Structure

acucaggg    c     U   U     AA           uac a   u 
        gcuu gccac GAU GUCCA  CGCAAUUCUug   g guc  
        |||| ||||| ||| |||||  |||||||||||   | ||| g
        cgag cggug cua caggu  guguuaagagc   c cgg  
--------    u     u   -     cg           caa -   c 

Annotation confidence Not enough data

Genome context

chr11: 101987090-101987180 [-]

Mature chi-miR-219

• Accession: MIMAT0036067
• Description: Capra hircus chi-miR-219 mature miRNA
• Sequence: 19 - UGAUUGUCCAAACGCAAUUCU - 39
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23981187
   Identification of conservative microRNAs in Saanen dairy goat testis through deep sequencing
   "Wu J, Zhu H, Song W, Li M, Liu C, Li N, Tang F, Mu H, Liao M, Li X, Guan W, Li X, Hua J"
   "Reprod Domest Anim (2014) 49:32-40