Stem-loop chi-mir-22

Accession

MI0030700

Description

Capra hircus chi-mir-22 precursor miRNA

Gene family

MIPF0000053; mir-22

Literature search

1 open access papers mention chi-mir-22
(1 sentences)

Sequence

ccucaccuggcugagccgcaguAGUUCUUCAGUGGCAAGCUUUauguccugacccagcuaAAGCUGCCAGUUGAAGAACuguugcccucugccccuggcuu
.....((.(((.(((..((((((((((((((((((((.((((((.((.........))))))))))))).))))))))))))))).))).)))...))...

Structure

ccuca  --u   u   cc               -     A      u  ccu 
     cc   ggc gag  gcaguAGUUCUUCAG UGGCA GCUUUa gu   g
     ||   ||| |||  ||||||||||||||| ||||| |||||| ||   a
     gg   ccg cuc  cguuguCAAGAAGUU ACCGU CGAAau cg   c
--uuc  ucc   u   -c               G     -      -  acc 

Annotation confidence Not enough data

Genome context

chr19: 23205693-23205793 [-]

Mature chi-miR-22-5p

• Accession: MIMAT0036075
• Description: Capra hircus chi-miR-22-5p mature miRNA
• Sequence: 23 - AGUUCUUCAGUGGCAAGCUUU - 43
• Evidence: experimental ; Illumina [1]

Mature chi-miR-22-3p

• Accession: MIMAT0036076
• Description: Capra hircus chi-miR-22-3p mature miRNA
• Sequence: 61 - AAGCUGCCAGUUGAAGAAC - 79
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23981187
   Identification of conservative microRNAs in Saanen dairy goat testis through deep sequencing
   "Wu J, Zhu H, Song W, Li M, Liu C, Li N, Tang F, Mu H, Liao M, Li X, Guan W, Li X, Hua J"
   "Reprod Domest Anim (2014) 49:32-40