Stem-loop chi-mir-24

Accession

MI0030713

Description

Capra hircus chi-mir-24 precursor miRNA

Literature search

68 open access papers mention chi-mir-24
(317 sentences)

Sequence

852682 reads, 2515.0 reads per million, 36 experiments

gacccgcccuccgGUGCCUACUGAGCUGAUAUCAGUUcucauuuuacacacUGGCUCAGUUCAGCAGGAACAGgagucga
....((..((((.((.(((.(((((((((..(((((.............))))).))))))))).))).)).)))).)).

Structure

gacc  cc    g  G   A         UA     Ucuca 
    cg  cucc GU CCU CUGAGCUGA  UCAGU     u
    ||  |||| || ||| |||||||||  |||||     u
    gc  gagG CA GGA GACUUGACU  GGUca     u
---a  -u    A  A   C         -C     cacau 

Annotation confidence High

Genome context

chr8: 82819368-82819447 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from chi-mir-24

Mature chi-miR-24-5p

• Accession: MIMAT0036090
• Description: Capra hircus chi-miR-24-5p mature miRNA
• Sequence: 14 - GUGCCUACUGAGCUGAUAUCAGUU - 37
• Evidence: experimental ; Illumina [1]

Mature chi-miR-24-3p

• Accession: MIMAT0036091
• Description: Capra hircus chi-miR-24-3p mature miRNA
• Sequence: 52 - UGGCUCAGUUCAGCAGGAACAG - 73
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23981187
   Identification of conservative microRNAs in Saanen dairy goat testis through deep sequencing
   "Wu J, Zhu H, Song W, Li M, Liu C, Li N, Tang F, Mu H, Liao M, Li X, Guan W, Li X, Hua J"
   "Reprod Domest Anim (2014) 49:32-40