miRBase entry: chi-mir-30f

Stem-loop chi-mir-30f


Accession
MI0030736
Description
Capra hircus chi-mir-30f precursor miRNA
Gene family
MIPF0000005; mir-30

Literature search
6 open access papers mention chi-mir-30f
(11 sentences)

Sequence

gagggccagauacUGUAAACACCCUACACUCUCAGCugugcacagugagaaagCUGGGAGGAGGCUGUUUACUCUcucugccuu
.(((((.(((....(((((((.(((.(.(((((((((..............))))))))))))).)))))))....))))))))

Structure
g     c   uacU       C   A A         gugcac 
 agggc aga    GUAAACA CCU C CUCUCAGCu      a
 ||||| |||    ||||||| ||| | |||||||||       
 uuccg ucu    CAUUUGU GGA G GAGGGUCga      g
-     -   cUCU       C   - -         aagagu 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr14: 2554762-2554845 [+]

Database links

Mature chi-miR-30f-5p

Accession MIMAT0036130
Description Capra hircus chi-miR-30f-5p mature miRNA
Sequence 14 - UGUAAACACCCUACACUCUCAGC - 36
Evidence experimental
Illumina [1]

Mature chi-miR-30f-3p

Accession MIMAT0036131
Description Capra hircus chi-miR-30f-3p mature miRNA
Sequence 54 - CUGGGAGGAGGCUGUUUACUCU - 75
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23981187
    Identification of conservative microRNAs in Saanen dairy goat testis through deep sequencing
    "Wu J, Zhu H, Song W, Li M, Liu C, Li N, Tang F, Mu H, Liao M, Li X, Guan W, Li X, Hua J"
    "Reprod Domest Anim (2014) 49:32-40