miRBase entry: chi-mir-345

Stem-loop chi-mir-345


Accession
MI0030755
Description
Capra hircus chi-mir-345 precursor miRNA
Gene family
MIPF0000189; mir-345


Sequence

gagacccaaacccaggucuGCUGACUCCUAGUCCAGUGCUugugauggcuggugggCCCUGAACUAGGGGUCUGGAGGccuggguuugaauaucaccagcc
((....(((((((((((((.(.((((((((((.(((.((((((........)))))).))).)))))))))).).)))))))))))))....)).......

Structure
-------  gacc             G U          C   U      gau 
       ga    caaacccaggucu C GACUCCUAGU CAG GCUugu   g
       ||    ||||||||||||| | |||||||||| ||| ||||||    
       cu    guuuggguccGGA G CUGGGGAUCA GUC Cgggug   g
ccgacca  auaa             G U          A   C      guc 


Annotation confidence Not enough data
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Genome context
chr21: 66338630-66338730 [+]

Database links

Mature chi-miR-345-5p

Accession MIMAT0036163
Description Capra hircus chi-miR-345-5p mature miRNA
Sequence 20 - GCUGACUCCUAGUCCAGUGCU - 40
Evidence experimental
Illumina [1]

Mature chi-miR-345-3p

Accession MIMAT0036164
Description Capra hircus chi-miR-345-3p mature miRNA
Sequence 57 - CCCUGAACUAGGGGUCUGGAGG - 78
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23981187
    Identification of conservative microRNAs in Saanen dairy goat testis through deep sequencing
    "Wu J, Zhu H, Song W, Li M, Liu C, Li N, Tang F, Mu H, Liao M, Li X, Guan W, Li X, Hua J"
    "Reprod Domest Anim (2014) 49:32-40