Stem-loop chi-mir-376e

Accession

MI0030771

Description

Capra hircus chi-mir-376e precursor miRNA

Gene family

MIPF0000091; mir-368

Literature search

1 open access papers mention chi-mir-376e
(1 sentences)

Sequence

gcucaauguuugauauucaaaaGGUGGAUAUUCCUUCUAUGUUUacaggauugacagcuaAACAUAGAGGAAAAUCCACAUUuuaaguaucuaaauuugcuuuuga
((.....((((((((((.((((.((((((.(((((.((((((((((.(......).).)))))))))))))).)))))).)))).)))))).))))..))......

Structure

------  ucaau    -      c    G      A     U         - a ga 
      gc     guuu gauauu aaaa GUGGAU UUCCU CUAUGUUUa c g  u
      ||     |||| |||||| |||| |||||| ||||| ||||||||| | |   
      cg     uaaa cuauga uuUU CACCUA AAGGA GAUACAAau g c  u
aguuuu  ---uu    u      a    A      A     -         c a ag 

Annotation confidence Not enough data

Genome context

chr21: 67116496-67116601 [+]

Clustered miRNAs

13 other miRNAs are < 10 kb from chi-mir-376e

Mature chi-miR-376e-5p

• Accession: MIMAT0036190
• Description: Capra hircus chi-miR-376e-5p mature miRNA
• Sequence: 23 - GGUGGAUAUUCCUUCUAUGUUU - 44
• Evidence: experimental ; Illumina [1]

Mature chi-miR-376e-3p

• Accession: MIMAT0036191
• Description: Capra hircus chi-miR-376e-3p mature miRNA
• Sequence: 61 - AACAUAGAGGAAAAUCCACAUU - 82
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23981187
   Identification of conservative microRNAs in Saanen dairy goat testis through deep sequencing
   "Wu J, Zhu H, Song W, Li M, Liu C, Li N, Tang F, Mu H, Liao M, Li X, Guan W, Li X, Hua J"
   "Reprod Domest Anim (2014) 49:32-40