Stem-loop chi-mir-451

Accession

MI0030798

Description

Capra hircus chi-mir-451 precursor miRNA

Gene family

MIPF0000148; mir-451

Literature search

5 open access papers mention chi-mir-451
(9 sentences)

Sequence

cuugggguggcgaggAAACCGUUACCAUUACUGAgUUUAGUAAUGGUAACGGUUCUcuugcugcacccaga
.((((((((((((((.(((((((((((((((((....))))))))))))))))).))))))))).))))).

Structure

c     -         A                 A 
 uuggg guggcgagg AACCGUUACCAUUACUG g
 ||||| ||||||||| |||||||||||||||||  
 gaccc cgucguucU UUGGCAAUGGUAAUGAU U
a     a         C                 U 

Annotation confidence Not enough data

Genome context

chr19: 20538775-20538845 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from chi-mir-451

Mature chi-miR-451-5p

• Accession: MIMAT0036237
• Description: Capra hircus chi-miR-451-5p mature miRNA
• Sequence: 16 - AAACCGUUACCAUUACUGA - 34
• Evidence: experimental ; Illumina [1]

Mature chi-miR-451-3p

• Accession: MIMAT0036238
• Description: Capra hircus chi-miR-451-3p mature miRNA
• Sequence: 36 - UUUAGUAAUGGUAACGGUUCU - 56
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23981187
   Identification of conservative microRNAs in Saanen dairy goat testis through deep sequencing
   "Wu J, Zhu H, Song W, Li M, Liu C, Li N, Tang F, Mu H, Liao M, Li X, Guan W, Li X, Hua J"
   "Reprod Domest Anim (2014) 49:32-40