Stem-loop sequence chi-mir-499

Accession

MI0030812 (change log)

Description

Capra hircus miR-499 stem-loop

Gene family

MIPF0000173; mir-499

Literature search

3 open access papers mention chi-mir-499
(3 sentences)

Stem-loop

   --       ccu   c --c        c   u  ua        a          acucc 
5'   ucugucc   gca c   ggggcggg ggc gu  agacuugc gugauguuua     u
     |||||||   ||| |   |||||||| ||| ||  |||||||| ||||||||||     c
3'   ggacggg   cgu g   cccugccc ucg cg  ucugaacg cacuacaagu     u
   ug       -uc   c cac        u   u  ug        a          gcacc 

Confidence

Annotation confidence: not enough data

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Genome context

Coordinates (CHIR_2.0; GCA_000317765.2)	Overlapping transcripts
chr13: 65701240-65701359 [+]	intergenic
chr13: 65705042-65705161 [+]	intergenic

Database links

• miRBase Tracker:MI0030812

Mature sequence chi-miR-499-5p

• Accession: MIMAT0036261
• Sequence: 31 - uuaagacuugcagugauguuu - 51
• Evidence: experimental; Illumina [1]

Mature sequence chi-miR-499-3p

• Accession: MIMAT0036262
• Sequence: 67 - gaacaucacagcaagucugugc - 88
• Evidence: experimental; Illumina [1]

References

1. PMID:23981187 "Identification of conservative microRNAs in Saanen dairy goat testis through deep sequencing" Wu J, Zhu H, Song W, Li M, Liu C, Li N, Tang F, Mu H, Liao M, Li X, Guan W, Li X, Hua J Reprod Domest Anim. 49:32-40(2014).