Stem-loop chi-mir-758

Accession

MI0030833

Description

Capra hircus chi-mir-758 precursor miRNA

Sequence

ccacgugccuggguacaugaggugguugaccagagagcacacgcuucauuugugccgUUUGUGACCUGGUCCACUAACCcucaguaucuaauccccucuug
.........(((((((.(((((((((.((((((.(.(((.((((.........).))).)))..))))))).))))..))))))))))))...........

Structure

--ccacgugcc       a     --    u      a -a   c   - uuc 
           uggguac ugagg  uggu gaccag g  gca acg c   a
           ||||||| |||||  |||| |||||| |  ||| ||| |   u
           aucuaug acucC  AUCA CUGGUC C  UGU Ugc g   u
guucuccccua       -     CA    C      - AG   U   c ugu 

Annotation confidence Low

Genome context

chr21: 67104376-67104476 [+]

Clustered miRNAs

12 other miRNAs are < 10 kb from chi-mir-758

Mature chi-miR-758

• Accession: MIMAT0036292
• Description: Capra hircus chi-miR-758 mature miRNA
• Sequence: 58 - UUUGUGACCUGGUCCACUAACC - 79
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23981187
   Identification of conservative microRNAs in Saanen dairy goat testis through deep sequencing
   "Wu J, Zhu H, Song W, Li M, Liu C, Li N, Tang F, Mu H, Liao M, Li X, Guan W, Li X, Hua J"
   "Reprod Domest Anim (2014) 49:32-40