miRBase entry: dsi-mir-983b

Stem-loop dsi-mir-983b


Accession
MI0030851
Description
Drosophila simulans dsi-mir-983b precursor miRNA


Sequence

AGAUAAUACCUGACGAACUCAugaaugacugaaaaucaUGUGUUCGAAAGGUAUUACUa
((.((((((((..(((((.(((((...........))))).)))))..)))))))))).

Structure
-  A        GA     U     auga 
 AG UAAUACCU  CGAAC CAuga    c
 || ||||||||  ||||| |||||    u
 UC AUUAUGGA  GCUUG GUacu    g
a  -        AA     U     aaaa 


Annotation confidence Not enough data
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Genome context
chrX: 3277365-3277423 [+]
Clustered miRNAs
7 other miRNAs are < 10 kb from dsi-mir-983b
Name Accession Chromosome Start End Strand Confidence




Database links

Mature dsi-miR-983b-5p

Accession MIMAT0039107
Description Drosophila simulans dsi-miR-983b-5p mature miRNA
Sequence 1 - AGAUAAUACCUGACGAACUCA - 21
Evidence experimental
Illumina [1]

Mature dsi-miR-983b-3p

Accession MIMAT0039108
Description Drosophila simulans dsi-miR-983b-3p mature miRNA
Sequence 39 - UGUGUUCGAAAGGUAUUACU - 58
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24985917
    Diversity of miRNAs, siRNAs, and piRNAs across 25 Drosophila cell lines
    "Wen J, Mohammed J, Bortolamiol-Becet D, Tsai H, Robine N, Westholm JO, Ladewig E, Dai Q, Okamura K, Flynt AS, Zhang D, Andrews J, Cherbas L, Kaufman TC, Cherbas P, Siepel A, Lai EC"
    "Genome Res (2014) 24:1236-1250