miRBase entry: dsi-mir-974

Stem-loop dsi-mir-974


Accession
MI0030861
Description
Drosophila simulans dsi-mir-974 precursor miRNA


Sequence

AAGCGAGCAAAGAAGUGGUAUUugcguuuccaagaacaaaUAUAACUUCUUUGAAAGCUAGGu
.(((...(((((((((.(((((((............))))))).)))))))))...)))....

Structure
---A   GAG         G       cguuu 
    AGC   CAAAGAAGU GUAUUug     c
    |||   ||||||||| |||||||      
    UCG   GUUUCUUCA UAUaaac     c
uGGA   AAA         A       aagaa 


Annotation confidence Not enough data
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Genome context
chrX: 15011455-15011517 [+]
Clustered miRNAs
7 other miRNAs are < 10 kb from dsi-mir-974
Name Accession Chromosome Start End Strand Confidence




Database links

Mature dsi-miR-974-5p

Accession MIMAT0039120
Description Drosophila simulans dsi-miR-974-5p mature miRNA
Sequence 1 - AAGCGAGCAAAGAAGUGGUAUU - 22
Evidence experimental
Illumina [1]

Mature dsi-miR-974-3p

Accession MIMAT0039121
Description Drosophila simulans dsi-miR-974-3p mature miRNA
Sequence 41 - UAUAACUUCUUUGAAAGCUAGG - 62
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24985917
    Diversity of miRNAs, siRNAs, and piRNAs across 25 Drosophila cell lines
    "Wen J, Mohammed J, Bortolamiol-Becet D, Tsai H, Robine N, Westholm JO, Ladewig E, Dai Q, Okamura K, Flynt AS, Zhang D, Andrews J, Cherbas L, Kaufman TC, Cherbas P, Siepel A, Lai EC"
    "Genome Res (2014) 24:1236-1250