miRBase entry: dse-mir-992

Stem-loop dse-mir-992


Accession
MI0030868
Description
Drosophila sechellia dse-mir-992 precursor miRNA


Sequence

CUGGUAUCAGAUAGGUGUAAUUUuuguguuuguauAGUACACGUUUCUGGAACCAAGcc
.((((.(((((.(.(((((....(((((....)))))))))).).))))).))))....

Structure
---C    A     U G     AUUU     u 
    UGGU UCAGA A GUGUA    uugug u
    |||| ||||| | |||||    |||||  
    ACCA GGUCU U CACAU    GAuau u
ccGA    A     U G     ----     g 


Annotation confidence Not enough data
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Genome context
scaffold_1: 14027554-14027612 [-]
Clustered miRNAs
7 other miRNAs are < 10 kb from dse-mir-992
Name Accession Chromosome Start End Strand Confidence




Database links

Mature dse-miR-992-5p

Accession MIMAT0039130
Description Drosophila sechellia dse-miR-992-5p mature miRNA
Sequence 1 - CUGGUAUCAGAUAGGUGUAAUUU - 23
Evidence experimental
Illumina [1]

Mature dse-miR-992-3p

Accession MIMAT0039131
Description Drosophila sechellia dse-miR-992-3p mature miRNA
Sequence 36 - AGUACACGUUUCUGGAACCAAG - 57
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24985917
    Diversity of miRNAs, siRNAs, and piRNAs across 25 Drosophila cell lines
    "Wen J, Mohammed J, Bortolamiol-Becet D, Tsai H, Robine N, Westholm JO, Ladewig E, Dai Q, Okamura K, Flynt AS, Zhang D, Andrews J, Cherbas L, Kaufman TC, Cherbas P, Siepel A, Lai EC"
    "Genome Res (2014) 24:1236-1250