miRBase entry: dse-mir-983

Stem-loop dse-mir-983


Accession
MI0030877
Description
Drosophila sechellia dse-mir-983 precursor miRNA


Sequence

AGUAAUACCUUUCGAACAUAUGauuuucagucauucaUGAGUUCGUUAGGUAUUAUCUa
.(((((((((..(((((.(((((...........))))).)))))..)))))))))...

Structure
--A         UU     A     uuuu 
   GUAAUACCU  CGAAC UAUGa    c
   |||||||||  ||||| |||||    a
   UAUUAUGGA  GCUUG GUacu    g
aUC         UU     A     uacu 


Annotation confidence Not enough data
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Genome context
scaffold_4: 2462240-2462298 [+]
Clustered miRNAs
7 other miRNAs are < 10 kb from dse-mir-983
Name Accession Chromosome Start End Strand Confidence




Database links

Mature dse-miR-983-5p

Accession MIMAT0039139
Description Drosophila sechellia dse-miR-983-5p mature miRNA
Sequence 1 - AGUAAUACCUUUCGAACAUAUG - 22
Evidence experimental
Illumina [1]

Mature dse-miR-983-3p

Accession MIMAT0039140
Description Drosophila sechellia dse-miR-983-3p mature miRNA
Sequence 38 - UGAGUUCGUUAGGUAUUAUCU - 58
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24985917
    Diversity of miRNAs, siRNAs, and piRNAs across 25 Drosophila cell lines
    "Wen J, Mohammed J, Bortolamiol-Becet D, Tsai H, Robine N, Westholm JO, Ladewig E, Dai Q, Okamura K, Flynt AS, Zhang D, Andrews J, Cherbas L, Kaufman TC, Cherbas P, Siepel A, Lai EC"
    "Genome Res (2014) 24:1236-1250