miRBase entry: dya-mir-9682

Stem-loop dya-mir-9682


Accession
MI0030900
Description
Drosophila yakuba dya-mir-9682 precursor miRNA


Sequence

CGGGGAAGUUACCUGGUGUAUUGuuuuuaaucaaccaAUCACUGGAUAGCUUUCCUAGAa
.((((((((((.((((((.((((.((......)).)))))))))).))))))))))....

Structure
---C          C      U    u  uu 
    GGGGAAGUUA CUGGUG AUUG uu  a
    |||||||||| |||||| |||| ||   
    UCCUUUCGAU GGUCAC UAac aa  a
aAGA          A      -    c  cu 


Annotation confidence Not enough data
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Genome context
chrX: 4178218-4178277 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from dya-mir-9682
Name Accession Chromosome Start End Strand Confidence




Database links

Mature dya-miR-9682-5p

Accession MIMAT0039172
Description Drosophila yakuba dya-miR-9682-5p mature miRNA
Sequence 1 - CGGGGAAGUUACCUGGUGUAUUG - 23
Evidence experimental
Illumina [1]

Mature dya-miR-9682-3p

Accession MIMAT0039173
Description Drosophila yakuba dya-miR-9682-3p mature miRNA
Sequence 38 - AUCACUGGAUAGCUUUCCUAGA - 59
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24985917
    Diversity of miRNAs, siRNAs, and piRNAs across 25 Drosophila cell lines
    "Wen J, Mohammed J, Bortolamiol-Becet D, Tsai H, Robine N, Westholm JO, Ladewig E, Dai Q, Okamura K, Flynt AS, Zhang D, Andrews J, Cherbas L, Kaufman TC, Cherbas P, Siepel A, Lai EC"
    "Genome Res (2014) 24:1236-1250