miRBase entry: der-mir-9691

Stem-loop der-mir-9691


Accession
MI0030919
Description
Drosophila erecta der-mir-9691 precursor miRNA


Sequence

caugauaUGCGAUUCGGAACCAUUCACUGcuguuuuucaauuuucaGUGAAUGAUAUCGAAUGGCUCAuuauuu
.(((((..((.((((((...(((((((((..(((....)))...)))))))))...)))))).))..)))))..

Structure
-c     aU  G      AAC         -cu   u 
  augau  GC AUUCGG   CAUUCACUG   guu u
  |||||  || ||||||   |||||||||   |||  
  uauuA  CG UAAGCU   GUAAGUGac   uaa u
uu     CU  G      AUA         uuu   c 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
scaffold_4690: 1633026-1633099 [-]
Clustered miRNAs
3 other miRNAs are < 10 kb from der-mir-9691
Name Accession Chromosome Start End Strand Confidence




Database links

Mature der-miR-9691-5p

Accession MIMAT0039199
Description Drosophila erecta der-miR-9691-5p mature miRNA
Sequence 8 - UGCGAUUCGGAACCAUUCACUG - 29
Evidence experimental
Illumina [1]

Mature der-miR-9691-3p

Accession MIMAT0039200
Description Drosophila erecta der-miR-9691-3p mature miRNA
Sequence 47 - GUGAAUGAUAUCGAAUGGCUCA - 68
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24985917
    Diversity of miRNAs, siRNAs, and piRNAs across 25 Drosophila cell lines
    "Wen J, Mohammed J, Bortolamiol-Becet D, Tsai H, Robine N, Westholm JO, Ladewig E, Dai Q, Okamura K, Flynt AS, Zhang D, Andrews J, Cherbas L, Kaufman TC, Cherbas P, Siepel A, Lai EC"
    "Genome Res (2014) 24:1236-1250