miRBase entry: der-mir-977

Stem-loop der-mir-977

Accession

MI0030926

Description

Drosophila erecta der-mir-977 precursor miRNA

Sequence

ucaacccaagguauggccUAGAUAACUCGGGUAUCACAucuuuaugcauucgauaucuggUGAGAUAAUUCACGUUGUCUAaaccauguuuuguaagaaauaa
......((((((((((..((((((((.((((((((................))))))))((((......))))))))))))..))))))))))..........

Structure

----ucaacc          cc        UCGGGUAUCACAucuuuaugcauucgauaucug    GA 
          caagguaugg  UAGAUAAC                                 gUGA  U
          ||||||||||  ||||||||                                 ||||   
          guuuuguacc  AUCUGUUG                                 CACU  A
aauaaagaau          aa        ---------------------------------    UA

Annotation confidence Not enough data

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Genome context

scaffold_4690: 9689075-9689177 [+]

Clustered miRNAs

6 other miRNAs are < 10 kb from der-mir-977

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature der-miR-977-5p

Accession	MIMAT0039210
Description	Drosophila erecta der-miR-977-5p mature miRNA
Sequence	19 - UAGAUAACUCGGGUAUCACA - 38
Evidence	experimental Illumina [1]

Mature der-miR-977-3p

Accession	MIMAT0039211
Description	Drosophila erecta der-miR-977-3p mature miRNA
Sequence	61 - UGAGAUAAUUCACGUUGUCUA - 81
Evidence	experimental Illumina [1]

References

PubMed ID: 24985917
Diversity of miRNAs, siRNAs, and piRNAs across 25 Drosophila cell lines
"Wen J, Mohammed J, Bortolamiol-Becet D, Tsai H, Robine N, Westholm JO, Ladewig E, Dai Q, Okamura K, Flynt AS, Zhang D, Andrews J, Cherbas L, Kaufman TC, Cherbas P, Siepel A, Lai EC"
"Genome Res (2014) 24:1236-1250