miRBase entry: der-mir-974

Stem-loop der-mir-974


Accession
MI0030928
Description
Drosophila erecta der-mir-974 precursor miRNA


Sequence

AAGCGAGCAAAGAAGUAGUAUUuguguuccaaaagucaaaUAUAACUUUUUUGGAAGCUACGg
.(((...(((((((((.(((((((............))))))).)))))))))...)))....

Structure
---A   GAG         A       uguuc 
    AGC   CAAAGAAGU GUAUUug     c
    |||   ||||||||| |||||||      
    UCG   GUUUUUUCA UAUaaac     a
gGCA   AAG         A       ugaaa 


Annotation confidence Not enough data
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Genome context
scaffold_4690: 9682476-9682538 [+]
Clustered miRNAs
7 other miRNAs are < 10 kb from der-mir-974
Name Accession Chromosome Start End Strand Confidence




Database links

Mature der-miR-974-5p

Accession MIMAT0039214
Description Drosophila erecta der-miR-974-5p mature miRNA
Sequence 1 - AAGCGAGCAAAGAAGUAGUAUU - 22
Evidence experimental
Illumina [1]

Mature der-miR-974-3p

Accession MIMAT0039215
Description Drosophila erecta der-miR-974-3p mature miRNA
Sequence 41 - UAUAACUUUUUUGGAAGCUACG - 62
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24985917
    Diversity of miRNAs, siRNAs, and piRNAs across 25 Drosophila cell lines
    "Wen J, Mohammed J, Bortolamiol-Becet D, Tsai H, Robine N, Westholm JO, Ladewig E, Dai Q, Okamura K, Flynt AS, Zhang D, Andrews J, Cherbas L, Kaufman TC, Cherbas P, Siepel A, Lai EC"
    "Genome Res (2014) 24:1236-1250