miRBase entry: dvi-mir-9693

Stem-loop dvi-mir-9693


Accession
MI0030934
Description
Drosophila virilis dvi-mir-9693 precursor miRNA


Sequence

ugGAAUCACGACACUCAACUGUUAUguagaaaacgauAACAGUGAGUCUCGCGUUC
..(((.(.(((.(((((.(((((((((.....)).)))))))))))).))).))))

Structure
ug   U A   C     A       -  a 
  GAA C CGA ACUCA CUGUUAU gu g
  ||| | ||| ||||| ||||||| || a
  CUU G GCU UGAGU GACAAua ca a
--   - C   C     -       g  a 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
scaffold_13042: 907106-907161 [-]
Clustered miRNAs
11 other miRNAs are < 10 kb from dvi-mir-9693
Name Accession Chromosome Start End Strand Confidence




Database links

Mature dvi-miR-9693-5p

Accession MIMAT0039226
Description Drosophila virilis dvi-miR-9693-5p mature miRNA
Sequence 3 - GAAUCACGACACUCAACUGUUAU - 25
Evidence experimental
Illumina [1]

Mature dvi-miR-9693-3p

Accession MIMAT0039227
Description Drosophila virilis dvi-miR-9693-3p mature miRNA
Sequence 38 - AACAGUGAGUCUCGCGUUC - 56
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24985917
    Diversity of miRNAs, siRNAs, and piRNAs across 25 Drosophila cell lines
    "Wen J, Mohammed J, Bortolamiol-Becet D, Tsai H, Robine N, Westholm JO, Ladewig E, Dai Q, Okamura K, Flynt AS, Zhang D, Andrews J, Cherbas L, Kaufman TC, Cherbas P, Siepel A, Lai EC"
    "Genome Res (2014) 24:1236-1250