miRBase entry: dvi-mir-9704-1

Stem-loop dvi-mir-9704-1


Accession
MI0030950
Description
Drosophila virilis dvi-mir-9704-1 precursor miRNA


Sequence

UGCAAAUUGUUUUUCGUAUUACuuauuucaauuauguUGAACGGGAAACAAUUUGUGCAg
.((((((((((((((((...((.((.......)).))...))))))))))))))))....

Structure
---U                AUU  u  uu 
    GCAAAUUGUUUUUCGU   AC ua  u
    ||||||||||||||||   || ||  c
    UGUUUAACAAAGGGCA   ug au  a
gACG                AGU  u  ua 


Annotation confidence Not enough data
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Genome context
scaffold_12723: 4641314-4641373 [-]
Clustered miRNAs
4 other miRNAs are < 10 kb from dvi-mir-9704-1
Name Accession Chromosome Start End Strand Confidence




Database links

Mature dvi-miR-9704-5p

Accession MIMAT0039258
Description Drosophila virilis dvi-miR-9704-5p mature miRNA
Sequence 1 - UGCAAAUUGUUUUUCGUAUUAC - 22
Evidence experimental
Illumina [1]

Mature dvi-miR-9704-3p

Accession MIMAT0039259
Description Drosophila virilis dvi-miR-9704-3p mature miRNA
Sequence 38 - UGAACGGGAAACAAUUUGUGCA - 59
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24985917
    Diversity of miRNAs, siRNAs, and piRNAs across 25 Drosophila cell lines
    "Wen J, Mohammed J, Bortolamiol-Becet D, Tsai H, Robine N, Westholm JO, Ladewig E, Dai Q, Okamura K, Flynt AS, Zhang D, Andrews J, Cherbas L, Kaufman TC, Cherbas P, Siepel A, Lai EC"
    "Genome Res (2014) 24:1236-1250