miRBase entry: dvi-mir-9710

Stem-loop dvi-mir-9710


Accession
MI0030969
Description
Drosophila virilis dvi-mir-9710 precursor miRNA


Sequence

UUUGCACACCGGGUCUUCGUAUacgugauuuggcaaaccguUGGAAGAUCCGCUAUGUAAAAUu
((((((...(((((((((....(((((......))...)))..)))))))))...))))))...

Structure
---      CAC         GUAU   ---  au 
   UUUGCA   CGGGUCUUC    acg   ug  u
   ||||||   |||||||||    |||   ||   
   AAAUGU   GCCUAGAAG    ugc   ac  u
uUA      AUC         --GU   caa  gg 


Annotation confidence Not enough data
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Genome context
scaffold_12970: 9428001-9428064 [-]
Clustered miRNAs
17 other miRNAs are < 10 kb from dvi-mir-9710
Name Accession Chromosome Start End Strand Confidence




Database links

Mature dvi-miR-9710-5p

Accession MIMAT0039287
Description Drosophila virilis dvi-miR-9710-5p mature miRNA
Sequence 1 - UUUGCACACCGGGUCUUCGUAU - 22
Evidence experimental
Illumina [1]

Mature dvi-miR-9710-3p

Accession MIMAT0039288
Description Drosophila virilis dvi-miR-9710-3p mature miRNA
Sequence 42 - UGGAAGAUCCGCUAUGUAAAAU - 63
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24985917
    Diversity of miRNAs, siRNAs, and piRNAs across 25 Drosophila cell lines
    "Wen J, Mohammed J, Bortolamiol-Becet D, Tsai H, Robine N, Westholm JO, Ladewig E, Dai Q, Okamura K, Flynt AS, Zhang D, Andrews J, Cherbas L, Kaufman TC, Cherbas P, Siepel A, Lai EC"
    "Genome Res (2014) 24:1236-1250