miRBase entry: dvi-mir-9721

Stem-loop dvi-mir-9721


Accession
MI0030986
Description
Drosophila virilis dvi-mir-9721 precursor miRNA


Sequence

uaugcaagaaagggcguuuguUUCUGCGGUUCGAAAUAGCGucAAAAGUUAUCUUCCAGCCGAcacuauuucuuaccucauugacgaaacacuuuuauucucaccg
........(((((...((((((..((.(((..(((((((.(((..................))).)))))))..))).))..))))))...)))))..........

Structure
--uaugcaag     gcg      UC  C   UC       C   AAAAGUUA 
          aaagg   uuuguU  UG GGU  GAAAUAG Guc        U
          |||||   ||||||  || |||  ||||||| |||         
          uuuuc   aagcag  ac cca  cuuuauc cAG        C
gccacucuua     aca      uu  u   uu       a   CCGACCUU 


Annotation confidence Not enough data
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Genome context
scaffold_12970: 9419681-9419786 [-]
Clustered miRNAs
19 other miRNAs are < 10 kb from dvi-mir-9721
Name Accession Chromosome Start End Strand Confidence




Database links

Mature dvi-miR-9721-5p

Accession MIMAT0039315
Description Drosophila virilis dvi-miR-9721-5p mature miRNA
Sequence 22 - UUCUGCGGUUCGAAAUAGCG - 41
Evidence experimental
Illumina [1]

Mature dvi-miR-9721-3p

Accession MIMAT0039316
Description Drosophila virilis dvi-miR-9721-3p mature miRNA
Sequence 44 - AAAAGUUAUCUUCCAGCCGA - 63
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24985917
    Diversity of miRNAs, siRNAs, and piRNAs across 25 Drosophila cell lines
    "Wen J, Mohammed J, Bortolamiol-Becet D, Tsai H, Robine N, Westholm JO, Ladewig E, Dai Q, Okamura K, Flynt AS, Zhang D, Andrews J, Cherbas L, Kaufman TC, Cherbas P, Siepel A, Lai EC"
    "Genome Res (2014) 24:1236-1250