miRBase entry: ocu-mir-373

Stem-loop ocu-mir-373


Accession
MI0030992
Description
Oryctolagus cuniculus ocu-mir-373 precursor miRNA
Gene family
MIPF0000068; mir-290


Sequence

gccccgacgguggcccgcaaaagggcagcacuucccuugcucuggacuggAAAGUGCUUCCCUUUUGUGUGUcaccgcccgccg
((...(.(((((((.((((((((((.(((((((.((............)).))))))).)))))))))).))))))).).))..

Structure
--  ccc a       c          c       c  uugcu 
  gc   g cgguggc cgcaaaaggg agcacuu cc     c
  ||   | ||||||| |||||||||| ||||||| ||      
  cg   c gccacUG GUGUUUUCCC UCGUGAA gg     u
gc  --c c       U          U       A  ucagg 


Annotation confidence Not enough data
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Genome context
GL018924.1: 215967-216050 [-]
Clustered miRNAs
4 other miRNAs are < 10 kb from ocu-mir-373
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ocu-miR-373-3p

Accession MIMAT0036326
Description Oryctolagus cuniculus ocu-miR-373-3p mature miRNA
Sequence 51 - AAAGUGCUUCCCUUUUGUGUGU - 72
Evidence experimental
SOLiD [1]

References

  1. PubMed ID: 23426804
    Discovery of pluripotency-associated microRNAs in rabbit preimplantation embryos and embryonic stem-like cells
    "Maraghechi P, Hiripi L, Toth G, Bontovics B, Bosze Z, Gocza E"
    "Reproduction (2013) 145:421-437