miRBase entry: ocu-mir-520e

Stem-loop ocu-mir-520e

Accession

MI0030994

Description

Oryctolagus cuniculus ocu-mir-520e precursor miRNA

Sequence

gcuccagucgccacccucaagagggaagcaacuuccgugcgcucagagggAAAGUGCUUCCUUUUUGAGUGugucugcgggaga
.((((.((.(.(((.(((((((((((((((..((((.(........).))))..))))))))))))))).))).).)).)))).

Structure

g    a  c c   c               ac    g gcg 
 cucc gu g cac cucaagagggaagca  uucc u   c
 |||| || | ||| |||||||||||||||  |||| |    
 gagg cg c guG GAGUUUUUCCUUCGU  AAgg a   u
a    g  u u   U               GA    g gac

Annotation confidence Not enough data

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Genome context

GL018924.1: 224104-224187 [-]

Clustered miRNAs

5 other miRNAs are < 10 kb from ocu-mir-520e

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature ocu-miR-520e

Accession	MIMAT0036329
Description	Oryctolagus cuniculus ocu-miR-520e mature miRNA
Sequence	51 - AAAGUGCUUCCUUUUUGAGUG - 71
Evidence	experimental SOLiD [1]

References

PubMed ID: 23426804
Discovery of pluripotency-associated microRNAs in rabbit preimplantation embryos and embryonic stem-like cells
"Maraghechi P, Hiripi L, Toth G, Bontovics B, Bosze Z, Gocza E"
"Reproduction (2013) 145:421-437