Stem-loop ocu-mir-498

Accession

MI0030995

Description

Oryctolagus cuniculus ocu-mir-498 precursor miRNA

Gene family

MIPF0000463; mir-498

Sequence

aucccugcaugccgagagaggcucaggcugugaUUUCAAGCUGGGGGGUGUUUUUGuaacuagguagaaagcaccccuguggcuugaacuucacaguuugacaaacauguggcaucugcagucu
....((((((((((........(((((((((((.((((((((.((((((((((((...........))))))))))))..))))))))..)))))))))))........)))))..)))))...

Structure

aucc     --     agagaggc           -U        -G            Guaa 
    cugca  ugccg        ucaggcuguga  UUCAAGCU  GGGGGUGUUUUU    c
    |||||  |||||        |||||||||||  ||||||||  ||||||||||||    u
    gacgu  acggu        aguuugacacu  aaguucgg  uccccacgaaag    a
-ucu     cu     guacaaac           uc        ug            augg 

Annotation confidence Not enough data

Genome context

GL018924.1: 224263-224386 [-]

Clustered miRNAs

5 other miRNAs are < 10 kb from ocu-mir-498

Mature ocu-miR-498

• Accession: MIMAT0036330
• Description: Oryctolagus cuniculus ocu-miR-498 mature miRNA
• Sequence: 34 - UUUCAAGCUGGGGGGUGUUUUUG - 56
• Evidence: experimental ; SOLiD [1]

References

1. PubMed ID: 23426804
   Discovery of pluripotency-associated microRNAs in rabbit preimplantation embryos and embryonic stem-like cells
   "Maraghechi P, Hiripi L, Toth G, Bontovics B, Bosze Z, Gocza E"
   "Reproduction (2013) 145:421-437