miRBase entry: gma-MIR9743

Stem-loop gma-MIR9743


Accession
MI0031025
Description
Glycine max gma-MIR9743 precursor miRNA


Sequence

ggcuugAGAGAGUGCUUUGAAGAAAAUGCCauucucgucucuaaguagagaaugcguaagguuaauaggggugacucgugugcauccuuuucucgcauacuuguccgaaucuaggauauuauaguuagggcucgugaaucagcacaugaggggaugcacgcgagagucacccaucaucaccuugcacauucucuacuugcaaaugagacugacauuuucuucaaagcacucucccaagc
.(((((.(((((((((((((((((((((.((.((((((...(((((((((((((.(((((((......((((((((((((((((((((.((((.(((((..(((((.......))))).))).)).))))((((((........)))))))))))))))))..)))))))))......))))))).)))))))))))))...)))))).)).))))))))))))))))))))).)))))

Structure
g     A                     C  u      cuc             c       uaauag         --           -------------------u    c  -   cu     ga 
 gcuug GAGAGUGCUUUGAAGAAAAUG Ca ucucgu   uaaguagagaaug guaaggu      gggugacuc  gugugcauccu                    uucu gc aua  ugucc  a
 ||||| ||||||||||||||||||||| || ||||||   ||||||||||||| |||||||      |||||||||  |||||||||||                    |||| || |||  |||||  u
 cgaac cucucacgaaacuucuuuuac gu agagua   guucaucucuuac cguucca      cccacugag  cgcacguaggg                    ggga ug uau  auagg  c
-     c                     a  c      aac             a       cuacua         ag           gaguacacgacuaagugcuc    u  a   -u     au 


Annotation confidence Not enough data
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Genome context
chr18: 18164989-18165227 [+]

Database links

Mature gma-miR9743

Accession MIMAT0036363
Description Glycine max gma-miR9743 mature miRNA
Sequence 7 - AGAGAGUGCUUUGAAGAAAAUGCC - 30
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24475082
    Systems and evolutionary characterization of microRNAs and their underlying regulatory networks in soybean cotyledons
    Goettel W, Liu Z, Xia J, Zhang W, Zhao PX, An YQ
    PLoS One (2014) 9:e86153