miRBase entry: gma-MIR9746b

Stem-loop gma-MIR9746b


Accession
MI0031029
Description
Glycine max gma-MIR9746b precursor miRNA
Gene family
MIPF0001884; MIR9746


Sequence

acgguuauccaauugagauucaagcacuuuucuauguggcuuuaagguguguuugaauggaacaccuuaaauccaugaagaAAAGUGUUUGAAUCUCAAUUAGAUaacca
..(((((((.(((((((((((((((((((((((.(((((.((((((((((...........)))))))))).))))).))))))))))))))))))))))).))))))).

Structure
ac       c                       a     c          guuu 
  gguuauc aauugagauucaagcacuuuucu ugugg uuuaaggugu    g
  ||||||| ||||||||||||||||||||||| ||||| ||||||||||    a
  ccaaUAG UUAACUCUAAGUUUGUGAAAaga guacc aaauuccaca    a
-a       A                       a     u          aggu 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr3: 2840637-2840746 [+]
Clustered miRNAs
2 other miRNAs are < 10 kb from gma-MIR9746b
Name Accession Chromosome Start End Strand Confidence




Database links

Mature gma-miR9746b

Accession MIMAT0036367
Description Glycine max gma-miR9746b mature miRNA
Sequence 82 - AAAGUGUUUGAAUCUCAAUUAGAU - 105
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24475082
    Systems and evolutionary characterization of microRNAs and their underlying regulatory networks in soybean cotyledons
    Goettel W, Liu Z, Xia J, Zhang W, Zhao PX, An YQ
    PLoS One (2014) 9:e86153