miRBase entry: gma-MIR9750

Stem-loop gma-MIR9750


Accession
MI0031040
Description
Glycine max gma-MIR9750 precursor miRNA

Literature search
1 open access papers mention gma-MIR9750
(1 sentences)

Sequence

cauuucagAGGCGCGUAUGGACUUACGACCugaagauuauuucuuccugaugaagcuaaagaucuggaucgaggaagcagaaggcaugguauaacugcuccucuucaagagcuucaucaccagcauuaucuucaggUGUAAGUCCAUAUGUGCUCUCUaaaau
.((((.((((((((((((((((((((.((((((((((.....((...(((((((((......(((.((..(((((.((((...((...))....))))))))).)).))))))))))))..))....)))))))))))))))))))))))))).)))).))))

Structure
c    c    -                G          uauuu  ucc         uaaaga   g  uc     a    -aag  a 
 auuu agAG GCGCGUAUGGACUUAC ACCugaagau     cu   ugaugaagc      ucu ga  gagga gcag    gc  
 |||| |||| |||||||||||||||| ||||||||||     ||   |||||||||      ||| ||  ||||| ||||    || u
 uaaa UCUC CGUGUAUACCUGAAUG Uggacuucua     ga   acuacuucg      aga cu  cuccu cguc    ug  
-    a    U                -          -uuac  -cc         ------   a  -u     -    aaua  g 


Annotation confidence Not enough data
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Genome context
chr6: 14495616-14495778 [-]

Database links

Mature gma-miR9750-3p

Accession MIMAT0036378
Description Glycine max gma-miR9750-3p mature miRNA
Sequence 137 - UGUAAGUCCAUAUGUGCUCUCU - 158
Evidence experimental
Illumina [1]

Mature gma-miR9750-5p

Accession MIMAT0039317
Description Glycine max gma-miR9750-5p mature miRNA
Sequence 9 - AGGCGCGUAUGGACUUACGACC - 30
Evidence experimental
Illumina [2]

References

  1. PubMed ID: 24475082
    Systems and evolutionary characterization of microRNAs and their underlying regulatory networks in soybean cotyledons
    Goettel W, Liu Z, Xia J, Zhang W, Zhao PX, An YQ
    PLoS One (2014) 9:e86153

  2. PubMed ID: 25465409
    An atlas of soybean small RNAs identifies phased siRNAs from hundreds of coding genes
    "Arikit S, Xia R, Kakrana A, Huang K, Zhai J, Yan Z, Valdes-Lopez O, Prince S, Musket TA, Nguyen HT, Stacey G, Meyers BC"
    "Plant Cell (2014) 26:4584-4601