miRBase entry: ggo-mir-519e

Stem-loop ggo-mir-519e


Accession
MI0031068
Description
Gorilla gorilla ggo-mir-519e precursor miRNA
Gene family
MIPF0000020; mir-515


Sequence

uuuggagcgagaagaucucaugcagucaUUCUCCAAAAGGGAGCACUUUCuguugucugaaagaaaacaAAGUGCCUCCUUUUAGAGUGUUacuguuugagaaaaaccaccuugaaguug
(((.(((........(((((.(((((.((.(((.(((((((.((((((..((((.(((...))).)))))))))).))))))).))).)).))))).)))))........))).)))...

Structure
---   g   cgagaaga     u     c  U   C       A      UC    g   g 
   uuu gag        ucuca gcagu aU CUC AAAAGGG GCACUU  uguu ucu  
   ||| |||        ||||| ||||| || ||| ||||||| ||||||  |||| ||| a
   gaa uuc        agagu uguca UG GAG UUUUCCU CGUGAA  acaa aga  
guu   g   caccaaaa     u     U  U   A       C      --    a   a 


Annotation confidence Not enough data
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Genome context
chr19: 53020783-53020902 [+]
Clustered miRNAs
3 other miRNAs are < 10 kb from ggo-mir-519e
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ggo-miR-519e-5p

Accession MIMAT0036407
Description Gorilla gorilla ggo-miR-519e-5p mature miRNA
Sequence 29 - UUCUCCAAAAGGGAGCACUUUC - 50
Evidence not_experimental

Mature ggo-miR-519e-3p

Accession MIMAT0036408
Description Gorilla gorilla ggo-miR-519e-3p mature miRNA
Sequence 70 - AAGUGCCUCCUUUUAGAGUGUU - 91
Evidence not_experimental

References

  1. PubMed ID: 24126940
    Exploration of miRNA families for hypotheses generation
    "Kamanu TK, Radovanovic A, Archer JA, Bajic VB"
    "Sci Rep (2013) 3:2940