miRBase entry: ggo-mir-525

Stem-loop ggo-mir-525


Accession
MI0031072
Description
Gorilla gorilla ggo-mir-525 precursor miRNA
Gene family
MIPF0000020; mir-515


Sequence

gugcuggagcaagaagaucucaagcugugacuCUCCAGAGGGAUGCACUUUCUcuuaugugaaaaaaaaGAAGGCGCUUCCCUUUAGAGCGuuacgguuuggguaaagcaacucugaag
.....((((.........(((((((((((((.(((.(((((((.((.((((((...............)))))).)).))))))).))).)))))))))))))........))))....

Structure
gugcu    caagaagau             u   C       U  A      cuuaug 
     ggag         cucaagcugugac CUC AGAGGGA GC CUUUCU      u
     ||||         ||||||||||||| ||| ||||||| || ||||||      g
     ucuc         ggguuuggcauuG GAG UUUCCCU CG GGAAGa      a
-gaag    -aacgaaau             C   A       U  C      aaaaaa 


Annotation confidence Not enough data
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Genome context
chr19: 53041178-53041296 [+]
Clustered miRNAs
6 other miRNAs are < 10 kb from ggo-mir-525
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ggo-miR-525-5p

Accession MIMAT0036412
Description Gorilla gorilla ggo-miR-525-5p mature miRNA
Sequence 33 - CUCCAGAGGGAUGCACUUUCU - 53
Evidence not_experimental

Mature ggo-miR-525-3p

Accession MIMAT0036413
Description Gorilla gorilla ggo-miR-525-3p mature miRNA
Sequence 70 - GAAGGCGCUUCCCUUUAGAGCG - 91
Evidence not_experimental

References

  1. PubMed ID: 24126940
    Exploration of miRNA families for hypotheses generation
    "Kamanu TK, Radovanovic A, Archer JA, Bajic VB"
    "Sci Rep (2013) 3:2940