miRBase entry: ggo-mir-518f

Stem-loop ggo-mir-518f


Accession
MI0031074
Description
Gorilla gorilla ggo-mir-518f precursor miRNA
Gene family
MIPF0000020; mir-515


Sequence

uuggagcaagaagaucucaugcugugaccCUCUAGAGGGAAGCACUUUCUCuugucuaaaagaaaaGAAAGCGCUUCUCUUUAGAGGauuacucuuugagaaaagcaacauugaag
.((..((.......(((((....((((.(((((((((((((((.(((((((((......))))...))))).))))))))))))))).))))....)))))...))..))......

Structure
-----u  ga  aagaaga     ugcu    c               A     ---    gu 
      ug  gc       ucuca    guga cCUCUAGAGGGAAGC CUUUC   UCuu  c
      ||  ||       |||||    |||| ||||||||||||||| |||||   ||||   
      ac  cg       agagu    cauu GGAGAUUUCUCUUCG GAAAG   agaa  u
gaaguu  aa  ----aaa     uucu    a               C     aaa    aa 


Annotation confidence Not enough data
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Genome context
chr19: 53043664-53043779 [+]
Clustered miRNAs
8 other miRNAs are < 10 kb from ggo-mir-518f
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ggo-miR-518f-5p

Accession MIMAT0036416
Description Gorilla gorilla ggo-miR-518f-5p mature miRNA
Sequence 30 - CUCUAGAGGGAAGCACUUUCUC - 51
Evidence not_experimental

Mature ggo-miR-518f-3p

Accession MIMAT0036417
Description Gorilla gorilla ggo-miR-518f-3p mature miRNA
Sequence 67 - GAAAGCGCUUCUCUUUAGAGG - 87
Evidence not_experimental

References

  1. PubMed ID: 24126940
    Exploration of miRNA families for hypotheses generation
    "Kamanu TK, Radovanovic A, Archer JA, Bajic VB"
    "Sci Rep (2013) 3:2940