Stem-loop ggo-mir-520c

Accession

MI0031077

Description

Gorilla gorilla ggo-mir-520c precursor miRNA

Gene family

MIPF0000020; mir-515

Sequence

caagaagaucuugggcugucaucCUCUAGAGGGAAGCACUUUCUGuugucugagagaaaagaaagugcuuccuuuuaaaggguuaccguuugagaaaagcaacauugaag
........((((((((.((.(((((.((((((((((((((((((.((.((...)).)).)))))))))))))))))).))))).)).))))))))...............

Structure

-------caagaaga        u  c     C                  G  g  u 
               ucuugggc gu aucCU UAGAGGGAAGCACUUUCU uu uc  
               |||||||| || ||||| |||||||||||||||||| || || g
               agaguuug ca uggga auuuuccuucgugaaaga aa ag  
gaaguuacaacgaaa        c  u     a                  a  g  a 

Annotation confidence Not enough data

Genome context

chr19: 53049906-53050015 [+]

Clustered miRNAs

9 other miRNAs are < 10 kb from ggo-mir-520c

Mature ggo-miR-520c

• Accession: MIMAT0036420
• Description: Gorilla gorilla ggo-miR-520c mature miRNA
• Sequence: 24 - CUCUAGAGGGAAGCACUUUCUG - 45
• Evidence: not_experimental

References

1. PubMed ID: 24126940
   Exploration of miRNA families for hypotheses generation
   "Kamanu TK, Radovanovic A, Archer JA, Bajic VB"
   "Sci Rep (2013) 3:2940