miRBase entry: ggo-mir-519c-2

Stem-loop ggo-mir-519c-2


Accession
MI0031087
Description
Gorilla gorilla ggo-mir-519c-2 precursor miRNA
Gene family
MIPF0000020; mir-515


Sequence

gcaagaagaucucagccugugaccCUCUAGAGGGAAGCGCUUUCUGuugucugaaagaaaggaaagugcuuucuuucagaggguuacgguuugagaaaa
.........((((((.((((((((((((.((((((((((((((((....(((...)))..)))))))))))))))).)))))))))))).))))))...

Structure
gcaagaaga      c            A                Guug   g 
         ucucag cugugaccCUCU GAGGGAAGCGCUUUCU    ucu  
         |||||| |||||||||||| ||||||||||||||||    ||| a
         agaguu ggcauugggaga uuucuuucgugaaagg    aga  
------aaa      u            c                --aa   a 


Annotation confidence Not enough data
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Genome context
chr19: 53092198-53092296 [+]
Clustered miRNAs
6 other miRNAs are < 10 kb from ggo-mir-519c-2
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ggo-miR-519c

Accession MIMAT0036435
Description Gorilla gorilla ggo-miR-519c mature miRNA
Sequence 25 - CUCUAGAGGGAAGCGCUUUCUG - 46
Evidence not_experimental

References

  1. PubMed ID: 24126940
    Exploration of miRNA families for hypotheses generation
    "Kamanu TK, Radovanovic A, Archer JA, Bajic VB"
    "Sci Rep (2013) 3:2940