Stem-loop ggo-mir-519a-1

Accession

MI0031090

Description

Gorilla gorilla ggo-mir-519a-1 precursor miRNA

Gene family

MIPF0000020; mir-515

Sequence

gcaagaagaucucaggcugugacaCUCUAGAGGGAAGCGCUUUCUGuuuucugaaaaagAAAGUGCAUCCUUUUAGAGUGUuacuguuugagaaaagcaacguugaag
.........((((((((.(((((((((((((((((.(((((((((............))))))))).))))))))))))))))).))))))))...............

Structure

------gcaagaaga        u                 A         Guuuu 
               ucucaggc gugacaCUCUAGAGGGA GCGCUUUCU     c
               |||||||| ||||||||||||||||| |||||||||      
               agaguuug cauUGUGAGAUUUUCCU CGUGAAAga     u
gaaguugcaacgaaa        u                 A         aaaag 

Annotation confidence Not enough data

Genome context

chr19: 53097153-53097260 [+]

Clustered miRNAs

7 other miRNAs are < 10 kb from ggo-mir-519a-1

Mature ggo-miR-519a-5p

• Accession: MIMAT0036439
• Description: Gorilla gorilla ggo-miR-519a-5p mature miRNA
• Sequence: 25 - CUCUAGAGGGAAGCGCUUUCUG - 46
• Evidence: not_experimental

Mature ggo-miR-519a-3p

• Accession: MIMAT0036440
• Description: Gorilla gorilla ggo-miR-519a-3p mature miRNA
• Sequence: 60 - AAAGUGCAUCCUUUUAGAGUGU - 81
• Evidence: not_experimental

References

1. PubMed ID: 24126940
   Exploration of miRNA families for hypotheses generation
   "Kamanu TK, Radovanovic A, Archer JA, Bajic VB"
   "Sci Rep (2013) 3:2940