Stem-loop ggo-mir-516a-1

Accession

MI0031092

Description

Gorilla gorilla ggo-mir-516a-1 precursor miRNA

Gene family

MIPF0000020; mir-515

Sequence

gugcuggagcaagaucucaggcugugaccUUCUCGAGGAAAGAAGCACUUUCuguugucugaaagaaaagaaagUGCUUCCUUUCAGAGGGUuacgguuugagaaaagca
.(((....)))...(((((((((((((((((((.((((...((((((((((((....(((...)))..)))))))))))))))).)))))))))))))))))))......

Structure

gugcuggagcaaga                   C    AAA            guug   g 
              ucucaggcugugaccUUCU GAGG   GAAGCACUUUCu    ucu  
              ||||||||||||||||||| ||||   ||||||||||||    ||| a
              agaguuuggcauUGGGAGA UUUC   CUUCGUgaaaga    aga  
--------acgaaa                   C    ---            --aa   a 

Annotation confidence Not enough data

Genome context

chr19: 53101171-53101280 [+]

Clustered miRNAs

8 other miRNAs are < 10 kb from ggo-mir-516a-1

Mature ggo-miR-516a-5p

• Accession: MIMAT0036441
• Description: Gorilla gorilla ggo-miR-516a-5p mature miRNA
• Sequence: 30 - UUCUCGAGGAAAGAAGCACUUUC - 52
• Evidence: not_experimental

Mature ggo-miR-516a-3p

• Accession: MIMAT0036442
• Description: Gorilla gorilla ggo-miR-516a-3p mature miRNA
• Sequence: 75 - UGCUUCCUUUCAGAGGGU - 92
• Evidence: not_experimental

References

1. PubMed ID: 24126940
   Exploration of miRNA families for hypotheses generation
   "Kamanu TK, Radovanovic A, Archer JA, Bajic VB"
   "Sci Rep (2013) 3:2940