miRBase entry: ggo-mir-1283-3

Stem-loop ggo-mir-1283-3


Accession
MI0031093
Description
Gorilla gorilla ggo-mir-1283-3 precursor miRNA
Gene family
MIPF0000020; mir-515


Sequence

cuggagcaagaagaucucaugcugugaguCUGCAAAGGGAAGCCCUUUCuguugucugaaagaaaagaaaucgcuucccuuuggaguguuacgguuugagaaaagcagcguugaaguug
..............(((((.(((((((..((.(((((((((((..(((((....(((...)))..)))))..))))))))))).))..))))))).)))))....((((......))))

Structure
----cuggagcaagaaga     u       gu  G           CC     guug   g 
                  ucuca gcuguga  CU CAAAGGGAAGC  UUUCu    ucu  
                  ||||| |||||||  || |||||||||||  |||||    ||| a
                  agagu uggcauu  ga guuucccuucg  aaaga    aga  
guugaaguugcgacgaaa     u       gu  g           cu     --aa   a 


Annotation confidence Not enough data
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Genome context
chr19: 53102663-53102781 [+]
Clustered miRNAs
7 other miRNAs are < 10 kb from ggo-mir-1283-3
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ggo-miR-1283

Accession MIMAT0036431
Description Gorilla gorilla ggo-miR-1283 mature miRNA
Sequence 30 - CUGCAAAGGGAAGCCCUUUC - 49
Evidence not_experimental

References

  1. PubMed ID: 24126940
    Exploration of miRNA families for hypotheses generation
    "Kamanu TK, Radovanovic A, Archer JA, Bajic VB"
    "Sci Rep (2013) 3:2940