Stem-loop ppy-mir-517c-2

Accession

MI0031102

Description

Pongo pygmaeus ppy-mir-517c-2 precursor miRNA

Gene family

MIPF0000020; mir-515

Sequence

gcaagaagaccucaugcugugacCCUCUAGAUGGAAGCACUGUCUguugucuaauaaaagAUCGUGCAUCCUUUUAGAGUGUuacuguuugagaaaagcaacguugaag
..........((((.((.(((((.(((((((.(((.((((.((((.((((...)))).)))).)))).))).))))))).))))).)).))))................

Structure

------gcaagaagac    u  u     C       U   A    U    g    c 
                cuca gc gugac CUCUAGA GGA GCAC GUCU uugu  
                |||| || ||||| ||||||| ||| |||| |||| |||| u
                gagu ug cauUG GAGAUUU CCU CGUG UAga aaua  
gaaguugcaacgaaaa    u  u     U       U   A    C    a    a 

Annotation confidence Not enough data

Genome context

Unknown

Mature ppy-miR-517c-5p

• Accession: MIMAT0036447
• Description: Pongo pygmaeus ppy-miR-517c-5p mature miRNA
• Sequence: 24 - CCUCUAGAUGGAAGCACUGUCU - 45
• Evidence: not_experimental

Mature ppy-miR-517c-3p

• Accession: MIMAT0036448
• Description: Pongo pygmaeus ppy-miR-517c-3p mature miRNA
• Sequence: 61 - AUCGUGCAUCCUUUUAGAGUGU - 82
• Evidence: not_experimental

References

1. PubMed ID: 24126940
   Exploration of miRNA families for hypotheses generation
   "Kamanu TK, Radovanovic A, Archer JA, Bajic VB"
   "Sci Rep (2013) 3:2940