Stem-loop ptr-mir-1283b

Accession

MI0031111

Description

Pan troglodytes ptr-mir-1283b precursor miRNA

Gene family

MIPF0000020; mir-515

Sequence

cuggagcaagaagaucucaggcugugaguCUGCAAAGGGAAGCCCUUUCuguugucugaaagaaaagaaaucgcuucccuuuggaguguuacgguuugagaaaagcagcguugaaguug
..............(((((((((((((..((.(((((((((((..(((((....(((...)))..)))))..))))))))))).))..)))))))))))))....((((......))))

Structure

----cuggagcaagaaga             gu  G           CC     guug   g 
                  ucucaggcuguga  CU CAAAGGGAAGC  UUUCu    ucu  
                  |||||||||||||  || |||||||||||  |||||    ||| a
                  agaguuuggcauu  ga guuucccuucg  aaaga    aga  
guugaaguugcgacgaaa             gu  g           cu     --aa   a 

Annotation confidence Not enough data

Genome context

chr19: 56105638-56105756 [+]

Clustered miRNAs

7 other miRNAs are < 10 kb from ptr-mir-1283b

Mature ptr-miR-1283b

• Accession: MIMAT0036458
• Description: Pan troglodytes ptr-miR-1283b mature miRNA
• Sequence: 30 - CUGCAAAGGGAAGCCCUUUC - 49
• Evidence: not_experimental

References

1. PubMed ID: 24126940
   Exploration of miRNA families for hypotheses generation
   "Kamanu TK, Radovanovic A, Archer JA, Bajic VB"
   "Sci Rep (2013) 3:2940