miRBase entry: tch-mir-200a

Stem-loop tch-mir-200a


Accession
MI0031125
Description
Tupaia chinensis tch-mir-200a precursor miRNA
Gene family
MIPF0000019; mir-8


Sequence

caucuuaccggacagugcuggacuucucaacggcucUAACACUGUCUGGUAACGAUGUU
(((((((((((((((((.((((((.......)).)))).))))))))))))).))))..

Structure
--    -             c    -  uc 
  cauc uuaccggacagug ugga cu  u
  |||| ||||||||||||| |||| ||  c
  GUAG AAUGGUCUGUCAC AUcu gg  a
UU    C             A    c  ca 


Annotation confidence Not enough data
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Genome context
KB364377.1: 9043899-9043957 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from tch-mir-200a
Name Accession Chromosome Start End Strand Confidence




Database links

Mature tch-miR-200a-3p

Accession MIMAT0036466
Description Tupaia chinensis tch-miR-200a-3p mature miRNA
Sequence 37 - UAACACUGUCUGGUAACGAUGUU - 59
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24314655
    microRNA expression in hepatitis B virus infected primary treeshrew hepatocytes and the independence of intracellular miR-122 level for de novo HBV infection in culture
    "Xu G, Gao Z, He W, Ma Y, Feng X, Cai T, Lu F, Liu L, Li W"
    "Virology (2014) 448:247-254