miRBase entry: tch-mir-125a

Stem-loop tch-mir-125a


Accession
MI0031133
Description
Tupaia chinensis tch-mir-125a precursor miRNA
Gene family
MIPF0000033; mir-10


Sequence

UCCCUGAGACCCUUUAACCUGUGaggauguccagggucacaggugagguucuugggag
((((.((((.((((..((((((((((....))....)))))))))))).)))))))).

Structure
-    U    C    UA        ----  a 
 UCCC GAGA CCUU  ACCUGUGa    gg u
 |||| |||| ||||  ||||||||    ||  
 aggg uucu ggag  uggacacu    cc g
g    -    u    --        ggga  u 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
KB321018.1: 123734-123791 [+]
Clustered miRNAs
2 other miRNAs are < 10 kb from tch-mir-125a
Name Accession Chromosome Start End Strand Confidence




Database links

Mature tch-miR-125a-5p

Accession MIMAT0036474
Description Tupaia chinensis tch-miR-125a-5p mature miRNA
Sequence 1 - UCCCUGAGACCCUUUAACCUGUG - 23
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24314655
    microRNA expression in hepatitis B virus infected primary treeshrew hepatocytes and the independence of intracellular miR-122 level for de novo HBV infection in culture
    "Xu G, Gao Z, He W, Ma Y, Feng X, Cai T, Lu F, Liu L, Li W"
    "Virology (2014) 448:247-254